Thanks mmoe, trying some your suggestions out. Good to know on the stock geo, wasnt sure if 3d paths needed it or not. Thought I had put a stock geo on one of those square lines, not sure if I didnt or I deleted it at some point messing with everything. I will make sure and always have it from now on.
On that boundary on the second pass, I cant for the life of me make the ends connect. I have tried everything I know, connect lines, intersect points, end points, clean up utility etc. My way of checking for gaps is to use select and hold shift and click on it, if its broken it wont all light up. The way I made the line was to use the line offset and offset it .250 outside of the original that I had extracted from the solid. When I do that it leaves gaps at the inside curves. Then nothing I try that normally works will reconnect them.