It all depends on what is the nature of the input to the EMS drive, if this is just a common 3 phase bridge, the it should not matter which 240v 1 phase pair goes to which pair of input terminals, incidentally, in N.A. with the grounded neutral, although not desirable, connecting either the ground or neutral to the other terminal will have no effect due to the reverse bias of the that rectifier.
But there are some VFD's that have one particular input pair that source the low voltage control separately, in this case it is important to use the correct pair for the 240v in.
Mitsubishi VFD's is one instance of this.
Al.
CNC, Mechatronics Integration and Custom Machine Design
“Logic will get you from A to B. Imagination will take you everywhere.”
Albert E.