Well after my long ordeal - I've reached a milestone. I received a replacement drive from Robert at ARPI machine sales - great guy to deal with. Hooked it up and managed to get the spindle running and to a point behaiving as it should - no hunting or jittering....
However I cannot get it to home correctly. At this point I'm wondering if the drive is an incorrect model for my machine. When it aligns the spindle moves around to where the prox switches to the high point of the spindle pulley (it's supposed to home to the middle of that lump - so an extra 90 degrees travel needed) I loosened the belt and slipped the spindle around 90 degrees, however it still aligns at the start of the bump on the pulley. If the pulley prox is activated and sitting anywhere within the 180deg band where the lump is, it'll assume it's aligned. So at this point I cant use the tool change.
My original drive was an SA1100 SNC, I replaced it with an SA1100 SNP, it worked for a little while but the drive was faulty, now have an SA1100S drive on it Is the SN* suffix required for my machine type? It's seeming as if the machine is not aware of the position of the spindle is at and is just using the prox as a home limit?