Seems to me you're overcomplicating the design and process.
There are a number of companies that make polypropylene honeycomb...it's used in various composite panels for the construction trades (think lightweight panels for high-end architectural apps, cube-farms and boat hulls).
Why not buy some off-the-shelf PP extrusions for a snap-together frame and capture the off-the-shelf honeycomb with that?
Might not be as cheap as $2/panel, but you can get 4x8 and 5x10 sheets of the PP honeycomb from many different vendors, and I wouldn't be suprised if you couldn't do the same with PP extrusions.
Examples:
Nida-Core Structure Honeycomb Core - Composite Material - Lightweight, High Strength Thermoplastic Honecyomb
Extruded Plastic Profiles - ACE Extrusions
I'm guessing that you're trying to replicate something like this? :
HoneySuperCell